STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001280845_05543Unannotated protein. (507 aa)    
Predicted Functional Partners:
GCA_001280845_05542
Unannotated protein.
 
  
 0.987
GCA_001280845_01479
Unannotated protein.
  
 
  0.864
GCA_001280845_01518
Unannotated protein.
     
 0.849
GCA_001280845_03018
Unannotated protein.
    
  0.836
GCA_001280845_00560
Unannotated protein.
  
  
 0.791
GCA_001280845_00561
Unannotated protein.
     
 0.747
GCA_001280845_00569
Unannotated protein.
     
 0.747
GCA_001280845_00570
Unannotated protein.
     
 0.747
GCA_001280845_03427
Unannotated protein.
     
 0.747
GCA_001280845_04329
Unannotated protein.
     
 0.747
Your Current Organism:
Bacillus sp. FJAT28004
NCBI taxonomy Id: 1679165
Other names: B. sp. FJAT-28004, Bacillus sp. FJAT-28004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.