Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FtsI | MrdA | RY70_638 | RY70_151 | Peptidoglycan synthetase. | Penicillin-binding protein. | 0.937 |
FtsI | RY70_1357 | RY70_638 | RY70_1357 | Peptidoglycan synthetase. | Putative secreted transglycosylase. | 0.517 |
MrdA | FtsI | RY70_151 | RY70_638 | Penicillin-binding protein. | Peptidoglycan synthetase. | 0.937 |
MrdA | RY70_1357 | RY70_151 | RY70_1357 | Penicillin-binding protein. | Putative secreted transglycosylase. | 0.440 |
RY70_1355 | RY70_1356 | RY70_1355 | RY70_1356 | Molecular chaperone. | Putative cobalt transport protein CbiM. | 0.773 |
RY70_1355 | RY70_1357 | RY70_1355 | RY70_1357 | Molecular chaperone. | Putative secreted transglycosylase. | 0.728 |
RY70_1355 | RY70_1359 | RY70_1355 | RY70_1359 | Molecular chaperone. | Hypothetical protein. | 0.723 |
RY70_1355 | RY70_1360 | RY70_1355 | RY70_1360 | Molecular chaperone. | Hypothetical protein. | 0.622 |
RY70_1355 | RY70_1361 | RY70_1355 | RY70_1361 | Molecular chaperone. | Hypothetical protein. | 0.602 |
RY70_1355 | TrsE | RY70_1355 | RY70_1358 | Molecular chaperone. | Transfer complex protein. | 0.727 |
RY70_1356 | RY70_1355 | RY70_1356 | RY70_1355 | Putative cobalt transport protein CbiM. | Molecular chaperone. | 0.773 |
RY70_1356 | RY70_1357 | RY70_1356 | RY70_1357 | Putative cobalt transport protein CbiM. | Putative secreted transglycosylase. | 0.723 |
RY70_1356 | RY70_1359 | RY70_1356 | RY70_1359 | Putative cobalt transport protein CbiM. | Hypothetical protein. | 0.723 |
RY70_1356 | RY70_1360 | RY70_1356 | RY70_1360 | Putative cobalt transport protein CbiM. | Hypothetical protein. | 0.622 |
RY70_1356 | RY70_1361 | RY70_1356 | RY70_1361 | Putative cobalt transport protein CbiM. | Hypothetical protein. | 0.602 |
RY70_1356 | TrsE | RY70_1356 | RY70_1358 | Putative cobalt transport protein CbiM. | Transfer complex protein. | 0.723 |
RY70_1357 | FtsI | RY70_1357 | RY70_638 | Putative secreted transglycosylase. | Peptidoglycan synthetase. | 0.517 |
RY70_1357 | MrdA | RY70_1357 | RY70_151 | Putative secreted transglycosylase. | Penicillin-binding protein. | 0.440 |
RY70_1357 | RY70_1355 | RY70_1357 | RY70_1355 | Putative secreted transglycosylase. | Molecular chaperone. | 0.728 |
RY70_1357 | RY70_1356 | RY70_1357 | RY70_1356 | Putative secreted transglycosylase. | Putative cobalt transport protein CbiM. | 0.723 |
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