Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CgmA | Dxs | RY70_1447 | RY70_1464 | Putative cyclic beta-1, 2-glucan modification protein. | 1-deoxy-D-xylulose-5-phosphate synthase. | 0.412 |
CgmA | RY70_1448 | RY70_1447 | RY70_1448 | Putative cyclic beta-1, 2-glucan modification protein. | Putative esterase. | 0.528 |
CgmA | RY70_1449 | RY70_1447 | RY70_1449 | Putative cyclic beta-1, 2-glucan modification protein. | Lysyl-tRNA synthetase. | 0.469 |
CgmA | RY70_963 | RY70_1447 | RY70_963 | Putative cyclic beta-1, 2-glucan modification protein. | Translation elongation factor. | 0.551 |
CgmA | SbpA | RY70_1447 | RY70_1133 | Putative cyclic beta-1, 2-glucan modification protein. | Multiple sugar-binding periplasmic protein. | 0.445 |
CgmA | YajC | RY70_1447 | RY70_1059 | Putative cyclic beta-1, 2-glucan modification protein. | Pre protein translocase, YajC subunit. | 0.638 |
Dxs | CgmA | RY70_1464 | RY70_1447 | 1-deoxy-D-xylulose-5-phosphate synthase. | Putative cyclic beta-1, 2-glucan modification protein. | 0.412 |
RY70_1448 | CgmA | RY70_1448 | RY70_1447 | Putative esterase. | Putative cyclic beta-1, 2-glucan modification protein. | 0.528 |
RY70_1448 | RY70_1449 | RY70_1448 | RY70_1449 | Putative esterase. | Lysyl-tRNA synthetase. | 0.963 |
RY70_1449 | CgmA | RY70_1449 | RY70_1447 | Lysyl-tRNA synthetase. | Putative cyclic beta-1, 2-glucan modification protein. | 0.469 |
RY70_1449 | RY70_1448 | RY70_1449 | RY70_1448 | Lysyl-tRNA synthetase. | Putative esterase. | 0.963 |
RY70_963 | CgmA | RY70_963 | RY70_1447 | Translation elongation factor. | Putative cyclic beta-1, 2-glucan modification protein. | 0.551 |
SbpA | CgmA | RY70_1133 | RY70_1447 | Multiple sugar-binding periplasmic protein. | Putative cyclic beta-1, 2-glucan modification protein. | 0.445 |
YajC | CgmA | RY70_1059 | RY70_1447 | Pre protein translocase, YajC subunit. | Putative cyclic beta-1, 2-glucan modification protein. | 0.638 |