Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AldH | GlxK | RY70_1502 | RY70_1508 | Aldehyde dehydrogenase. | Glycerate kinase. | 0.905 |
CumB | GlxK | RY70_13 | RY70_1508 | Cytosine/adenosine deaminase. | Glycerate kinase. | 0.902 |
Exp | GlxK | RY70_1510 | RY70_1508 | Cation-transporting ATPase. | Glycerate kinase. | 0.445 |
Exp | MacB | RY70_1510 | RY70_1509 | Cation-transporting ATPase. | Macrolide export ATP-binding/permease. | 0.603 |
GlxK | AldH | RY70_1508 | RY70_1502 | Glycerate kinase. | Aldehyde dehydrogenase. | 0.905 |
GlxK | CumB | RY70_1508 | RY70_13 | Glycerate kinase. | Cytosine/adenosine deaminase. | 0.902 |
GlxK | Exp | RY70_1508 | RY70_1510 | Glycerate kinase. | Cation-transporting ATPase. | 0.445 |
GlxK | GpmB | RY70_1508 | RY70_1149 | Glycerate kinase. | Fructose-2,6-bisphosphatase. | 0.900 |
GlxK | MacB | RY70_1508 | RY70_1509 | Glycerate kinase. | Macrolide export ATP-binding/permease. | 0.737 |
GlxK | gpm2 | RY70_1508 | RY70_1633 | Glycerate kinase. | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.903 |
GlxK | tdcF | RY70_1508 | RY70_302 | Glycerate kinase. | Plastid-lipid associated protein. | 0.675 |
GpmB | GlxK | RY70_1149 | RY70_1508 | Fructose-2,6-bisphosphatase. | Glycerate kinase. | 0.900 |
GpmB | gpm2 | RY70_1149 | RY70_1633 | Fructose-2,6-bisphosphatase. | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.919 |
MacB | Exp | RY70_1509 | RY70_1510 | Macrolide export ATP-binding/permease. | Cation-transporting ATPase. | 0.603 |
MacB | GlxK | RY70_1509 | RY70_1508 | Macrolide export ATP-binding/permease. | Glycerate kinase. | 0.737 |
gpm2 | GlxK | RY70_1633 | RY70_1508 | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Glycerate kinase. | 0.903 |
gpm2 | GpmB | RY70_1633 | RY70_1149 | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Fructose-2,6-bisphosphatase. | 0.919 |
tdcF | GlxK | RY70_302 | RY70_1508 | Plastid-lipid associated protein. | Glycerate kinase. | 0.675 |