STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FtsWProtein involved in cell wall formation and stabilization of the FtsZ ring during cell division. (492 aa)    
Predicted Functional Partners:
MrdA
Penicillin-binding protein.
 
 0.999
PrpC
Protein phosphatase.
  
 0.964
FtsQ
Cell division protein.
 
 
 0.957
RY70_154
FHA domain-containing protein.
 
   
 0.936
FstW
Cell division protein FtsW.
  
  
0.934
PknB
Putative serine/threonine-protein kinase.
 
 
 0.920
FtsI
Peptidoglycan synthetase.
 
 
 0.906
prkC_2
Serine-threonine protein kinase.
 
 
 0.898
RY70_155
FHA domain-containing protein.
 
   
 0.887
MurF
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase.
 
 
 0.787
Your Current Organism:
Bifidobacterium bifidum
NCBI taxonomy Id: 1681
Other names: AS 1.2212, ATCC 29521, Actinobacterium bifidum, Actinomyces bifidus, Actinomyces parabifidus, B. bifidum, BCRC 14615, Bacillus bifidus, Bacillus bifidus communis, Bacterium bifidum, Bacteroides bifidus, Bifidibacterium bifidum, CCRC 14615, CCRC:14615, CCUG 18364, CCUG 45217, CIP 56.7, Cohnistreptothrix bifidus, DSM 20456, IFO 14252, KCTC 3202, LMG 11041, LMG 8810, LMG:11041, LMG:8810, Lactobacillus bifidus type II, Lactobacillus parabifidus, NBRC 100015, NBRC 14252, NCFB 2715, NCIMB 702715, NCTC 13001, Nocardia bifida, Tissieria bifida, strain Ti
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