Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DinJ | MenA | RY70_382 | RY70_1634 | DNA-damage-inducible protein J. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.644 |
DinJ | RY70_385 | RY70_382 | RY70_385 | DNA-damage-inducible protein J. | Hypothetical protein. | 0.477 |
DinJ-2 | MenA | RY70_511 | RY70_1634 | Hypothetical protein. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.644 |
MenA | DinJ | RY70_1634 | RY70_382 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | DNA-damage-inducible protein J. | 0.644 |
MenA | DinJ-2 | RY70_1634 | RY70_511 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | Hypothetical protein. | 0.644 |
MenA | RY70_1372 | RY70_1634 | RY70_1372 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | DNA-damage-inducible protein J. | 0.648 |
MenA | RY70_385 | RY70_1634 | RY70_385 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | Hypothetical protein. | 0.648 |
MenA | gpm2 | RY70_1634 | RY70_1633 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.721 |
MenA | lysS | RY70_1634 | RY70_1635 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | Lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.648 |
RY70_1372 | MenA | RY70_1372 | RY70_1634 | DNA-damage-inducible protein J. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.648 |
RY70_385 | DinJ | RY70_385 | RY70_382 | Hypothetical protein. | DNA-damage-inducible protein J. | 0.477 |
RY70_385 | MenA | RY70_385 | RY70_1634 | Hypothetical protein. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.648 |
gpm2 | MenA | RY70_1633 | RY70_1634 | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.721 |
gpm2 | lysS | RY70_1633 | RY70_1635 | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.518 |
lysS | MenA | RY70_1635 | RY70_1634 | Lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.648 |
lysS | gpm2 | RY70_1635 | RY70_1633 | Lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.518 |