Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DdpA | DppB | RY70_1818 | RY70_659 | Putative D, D-dipeptide-binding periplasmic protein. | Dipeptide transport system permease. | 0.875 |
DdpA | GsiA | RY70_1818 | RY70_661 | Putative D, D-dipeptide-binding periplasmic protein. | ATP binding protein of ABC transporter. | 0.607 |
DdpA | GsiD | RY70_1818 | RY70_660 | Putative D, D-dipeptide-binding periplasmic protein. | ABC-type dipeptide/oligopeptide/nickel transport system. | 0.759 |
DdpA | Nth | RY70_1818 | RY70_1817 | Putative D, D-dipeptide-binding periplasmic protein. | Endonuclease III. | 0.563 |
DdpA | OppF | RY70_1818 | RY70_1485 | Putative D, D-dipeptide-binding periplasmic protein. | ATPase component of various ABC-type transport systems. | 0.697 |
DdpA | OppF-2 | RY70_1818 | RY70_1486 | Putative D, D-dipeptide-binding periplasmic protein. | Peptide ABC transporter substrate-binding protein. | 0.729 |
DdpA | RY70_1487 | RY70_1818 | RY70_1487 | Putative D, D-dipeptide-binding periplasmic protein. | Solute-binding protein of ABC transporter system for peptides. | 0.881 |
DdpA | RY70_702 | RY70_1818 | RY70_702 | Putative D, D-dipeptide-binding periplasmic protein. | Transport protein. | 0.836 |
DdpA | RY70_703 | RY70_1818 | RY70_703 | Putative D, D-dipeptide-binding periplasmic protein. | Putative peptide transport permease protein. | 0.860 |
DdpA | dppB | RY70_1818 | RY70_1488 | Putative D, D-dipeptide-binding periplasmic protein. | ABC-type dipeptide/oligopeptide/nickel transport system. | 0.954 |
DppB | DdpA | RY70_659 | RY70_1818 | Dipeptide transport system permease. | Putative D, D-dipeptide-binding periplasmic protein. | 0.875 |
DppB | GsiA | RY70_659 | RY70_661 | Dipeptide transport system permease. | ATP binding protein of ABC transporter. | 0.980 |
DppB | GsiD | RY70_659 | RY70_660 | Dipeptide transport system permease. | ABC-type dipeptide/oligopeptide/nickel transport system. | 0.983 |
DppB | OppF | RY70_659 | RY70_1485 | Dipeptide transport system permease. | ATPase component of various ABC-type transport systems. | 0.834 |
DppB | OppF-2 | RY70_659 | RY70_1486 | Dipeptide transport system permease. | Peptide ABC transporter substrate-binding protein. | 0.863 |
DppB | RY70_1487 | RY70_659 | RY70_1487 | Dipeptide transport system permease. | Solute-binding protein of ABC transporter system for peptides. | 0.923 |
DppB | RY70_703 | RY70_659 | RY70_703 | Dipeptide transport system permease. | Putative peptide transport permease protein. | 0.976 |
GsiA | DdpA | RY70_661 | RY70_1818 | ATP binding protein of ABC transporter. | Putative D, D-dipeptide-binding periplasmic protein. | 0.607 |
GsiA | DppB | RY70_661 | RY70_659 | ATP binding protein of ABC transporter. | Dipeptide transport system permease. | 0.980 |
GsiA | GsiD | RY70_661 | RY70_660 | ATP binding protein of ABC transporter. | ABC-type dipeptide/oligopeptide/nickel transport system. | 0.996 |
page 1 of 4