Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BglA | LicA | RY70_1872 | RY70_1873 | 6-phospho-beta-glucosidase BglA. | Lichenan-specific phospho transferase enzyme IIA component. | 0.982 |
BglA | RY70_1869 | RY70_1872 | RY70_1869 | 6-phospho-beta-glucosidase BglA. | Transmembrane protein. | 0.460 |
BglA | RY70_1870 | RY70_1872 | RY70_1870 | 6-phospho-beta-glucosidase BglA. | Hypothetical protein. | 0.460 |
BglA | RY70_1871 | RY70_1872 | RY70_1871 | 6-phospho-beta-glucosidase BglA. | Hydrolase (HAD superfamily). | 0.603 |
LicA | BglA | RY70_1873 | RY70_1872 | Lichenan-specific phospho transferase enzyme IIA component. | 6-phospho-beta-glucosidase BglA. | 0.982 |
LicA | RY70_1871 | RY70_1873 | RY70_1871 | Lichenan-specific phospho transferase enzyme IIA component. | Hydrolase (HAD superfamily). | 0.476 |
RY70_1086 | RY70_1871 | RY70_1086 | RY70_1871 | Putative hydrolase. | Hydrolase (HAD superfamily). | 0.550 |
RY70_1086 | YxeH | RY70_1086 | RY70_1868 | Putative hydrolase. | HAD family hydrolase. | 0.717 |
RY70_1869 | BglA | RY70_1869 | RY70_1872 | Transmembrane protein. | 6-phospho-beta-glucosidase BglA. | 0.460 |
RY70_1869 | RY70_1870 | RY70_1869 | RY70_1870 | Transmembrane protein. | Hypothetical protein. | 0.773 |
RY70_1869 | RY70_1871 | RY70_1869 | RY70_1871 | Transmembrane protein. | Hydrolase (HAD superfamily). | 0.586 |
RY70_1869 | YxeH | RY70_1869 | RY70_1868 | Transmembrane protein. | HAD family hydrolase. | 0.497 |
RY70_1870 | BglA | RY70_1870 | RY70_1872 | Hypothetical protein. | 6-phospho-beta-glucosidase BglA. | 0.460 |
RY70_1870 | RY70_1869 | RY70_1870 | RY70_1869 | Hypothetical protein. | Transmembrane protein. | 0.773 |
RY70_1870 | RY70_1871 | RY70_1870 | RY70_1871 | Hypothetical protein. | Hydrolase (HAD superfamily). | 0.586 |
RY70_1870 | YxeH | RY70_1870 | RY70_1868 | Hypothetical protein. | HAD family hydrolase. | 0.497 |
RY70_1871 | BglA | RY70_1871 | RY70_1872 | Hydrolase (HAD superfamily). | 6-phospho-beta-glucosidase BglA. | 0.603 |
RY70_1871 | LicA | RY70_1871 | RY70_1873 | Hydrolase (HAD superfamily). | Lichenan-specific phospho transferase enzyme IIA component. | 0.476 |
RY70_1871 | RY70_1086 | RY70_1871 | RY70_1086 | Hydrolase (HAD superfamily). | Putative hydrolase. | 0.550 |
RY70_1871 | RY70_1869 | RY70_1871 | RY70_1869 | Hydrolase (HAD superfamily). | Transmembrane protein. | 0.586 |
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