Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RY70_1131 | RY70_1653 | RY70_1131 | RY70_1653 | Inositol-5-monophosphate dehydrogenase. | Putative 5'-nucleotidase. | 0.916 |
RY70_1131 | guaB | RY70_1131 | RY70_1529 | Inositol-5-monophosphate dehydrogenase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.963 |
RY70_1131 | hpt | RY70_1131 | RY70_1584 | Inositol-5-monophosphate dehydrogenase. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.921 |
RY70_1131 | purA | RY70_1131 | RY70_204 | Inositol-5-monophosphate dehydrogenase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.963 |
RY70_1131 | purB | RY70_1131 | RY70_733 | Inositol-5-monophosphate dehydrogenase. | Adenylosuccinate lyase. | 0.804 |
RY70_1131 | purH | RY70_1131 | RY70_1054 | Inositol-5-monophosphate dehydrogenase. | Bifunctional purine biosynthesis protein PurH. | 0.950 |
RY70_1131 | purL_4 | RY70_1131 | RY70_1436 | Inositol-5-monophosphate dehydrogenase. | Phosphoribosylformylglycinamidine synthase. | 0.861 |
RY70_1653 | RY70_1131 | RY70_1653 | RY70_1131 | Putative 5'-nucleotidase. | Inositol-5-monophosphate dehydrogenase. | 0.916 |
RY70_1653 | guaB | RY70_1653 | RY70_1529 | Putative 5'-nucleotidase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.925 |
RY70_1653 | hpt | RY70_1653 | RY70_1584 | Putative 5'-nucleotidase. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.904 |
RY70_1653 | purA | RY70_1653 | RY70_204 | Putative 5'-nucleotidase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.916 |
RY70_1653 | purB | RY70_1653 | RY70_733 | Putative 5'-nucleotidase. | Adenylosuccinate lyase. | 0.916 |
RY70_1653 | purH | RY70_1653 | RY70_1054 | Putative 5'-nucleotidase. | Bifunctional purine biosynthesis protein PurH. | 0.913 |
RY70_1653 | purL_4 | RY70_1653 | RY70_1436 | Putative 5'-nucleotidase. | Phosphoribosylformylglycinamidine synthase. | 0.446 |
argG_1 | aspA | RY70_1217 | RY70_1387 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate ammonia-lyase. | 0.839 |
argG_1 | purA | RY70_1217 | RY70_204 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.928 |
argG_1 | purL_4 | RY70_1217 | RY70_1436 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Phosphoribosylformylglycinamidine synthase. | 0.457 |
argG_1 | pyrB | RY70_1217 | RY70_992 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.907 |
aspA | argG_1 | RY70_1387 | RY70_1217 | Aspartate ammonia-lyase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.839 |
aspA | purA | RY70_1387 | RY70_204 | Aspartate ammonia-lyase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.922 |
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