Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Exp5 | RY70_397 | RY70_307 | RY70_397 | PTS system glucose-specific EIICBA component. | Hypothetical protein. | 0.645 |
Exp5 | bglF | RY70_307 | RY70_1656 | PTS system glucose-specific EIICBA component. | Glucose-specific II BC. | 0.997 |
Exp5 | ptsG_1 | RY70_307 | RY70_308 | PTS system glucose-specific EIICBA component. | PTS system protein. | 0.999 |
RY70_395 | RY70_396 | RY70_395 | RY70_396 | Hypothetical protein. | Hypothetical protein. | 0.572 |
RY70_395 | RY70_397 | RY70_395 | RY70_397 | Hypothetical protein. | Hypothetical protein. | 0.442 |
RY70_395 | RY70_398 | RY70_395 | RY70_398 | Hypothetical protein. | Sodium/dicarboxylate symporter family protein. | 0.439 |
RY70_396 | RY70_395 | RY70_396 | RY70_395 | Hypothetical protein. | Hypothetical protein. | 0.572 |
RY70_396 | RY70_397 | RY70_396 | RY70_397 | Hypothetical protein. | Hypothetical protein. | 0.584 |
RY70_396 | RY70_398 | RY70_396 | RY70_398 | Hypothetical protein. | Sodium/dicarboxylate symporter family protein. | 0.579 |
RY70_397 | Exp5 | RY70_397 | RY70_307 | Hypothetical protein. | PTS system glucose-specific EIICBA component. | 0.645 |
RY70_397 | RY70_395 | RY70_397 | RY70_395 | Hypothetical protein. | Hypothetical protein. | 0.442 |
RY70_397 | RY70_396 | RY70_397 | RY70_396 | Hypothetical protein. | Hypothetical protein. | 0.584 |
RY70_397 | RY70_398 | RY70_397 | RY70_398 | Hypothetical protein. | Sodium/dicarboxylate symporter family protein. | 0.782 |
RY70_397 | RY70_399 | RY70_397 | RY70_399 | Hypothetical protein. | Methyltransferase. | 0.400 |
RY70_397 | bglF | RY70_397 | RY70_1656 | Hypothetical protein. | Glucose-specific II BC. | 0.645 |
RY70_397 | ptsG_1 | RY70_397 | RY70_308 | Hypothetical protein. | PTS system protein. | 0.645 |
RY70_398 | RY70_395 | RY70_398 | RY70_395 | Sodium/dicarboxylate symporter family protein. | Hypothetical protein. | 0.439 |
RY70_398 | RY70_396 | RY70_398 | RY70_396 | Sodium/dicarboxylate symporter family protein. | Hypothetical protein. | 0.579 |
RY70_398 | RY70_397 | RY70_398 | RY70_397 | Sodium/dicarboxylate symporter family protein. | Hypothetical protein. | 0.782 |
RY70_398 | RY70_399 | RY70_398 | RY70_399 | Sodium/dicarboxylate symporter family protein. | Methyltransferase. | 0.409 |
page 1 of 2