typA protein (Bifidobacterium bifidum) - STRING interaction network

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[Homology]

Score

typA

GTP-binding protein. (640 aa)

Predicted Functional Partners:

relA

0.634

guaA_1

0.609

RhlE

0.597

gltB

0.579

nfo

0.559

infC

0.519

TrmD

0.513

rpsI_1

0.511

nifS

0.495

PheA

0.494

Your Current Organism:

Bifidobacterium bifidum

NCBI taxonomy Id: 1681
Other names: AS 1.2212, ATCC 29521, Actinobacterium bifidum, Actinomyces bifidus, Actinomyces parabifidus, B. bifidum, BCRC 14615, Bacillus bifidus, Bacillus bifidus communis, Bacterium bifidum, Bacteroides bifidus, Bifidibacterium bifidum, CCRC 14615, CCRC:14615, CCUG 18364, CCUG 45217, CIP 56.7, Cohnistreptothrix bifidus, DSM 20456, IFO 14252, KCTC 3202, LMG 11041, LMG 8810, LMG:11041, LMG:8810, Lactobacillus bifidus type II, Lactobacillus parabifidus, NBRC 100015, NBRC 14252, NCFB 2715, NCIMB 702715, NCTC 13001, Nocardia bifida, Tissieria bifida, strain Ti

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PheA	gltB	RY70_698	RY70_964	Prephenate dehydratase.	Ferredoxin-dependent glutamate synthase.	0.500
PheA	typA	RY70_698	RY70_696	Prephenate dehydratase.	GTP-binding protein.	0.494
RhlE	typA	RY70_1547	RY70_696	Superfamily II DNA and RNA helicase.	GTP-binding protein.	0.597
TrmD	guaA_1	RY70_402	RY70_883	tRNA (Guanine37-N1)-methyltransferase.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.749
TrmD	infC	RY70_402	RY70_684	tRNA (Guanine37-N1)-methyltransferase.	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.457
TrmD	rpsI_1	RY70_402	RY70_1713	tRNA (Guanine37-N1)-methyltransferase.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.759
TrmD	typA	RY70_402	RY70_696	tRNA (Guanine37-N1)-methyltransferase.	GTP-binding protein.	0.513
gltB	PheA	RY70_964	RY70_698	Ferredoxin-dependent glutamate synthase.	Prephenate dehydratase.	0.500
gltB	guaA_1	RY70_964	RY70_883	Ferredoxin-dependent glutamate synthase.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.731
gltB	typA	RY70_964	RY70_696	Ferredoxin-dependent glutamate synthase.	GTP-binding protein.	0.579
guaA_1	TrmD	RY70_883	RY70_402	GMP synthase; Catalyzes the synthesis of GMP from XMP.	tRNA (Guanine37-N1)-methyltransferase.	0.749
guaA_1	gltB	RY70_883	RY70_964	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Ferredoxin-dependent glutamate synthase.	0.731
guaA_1	infC	RY70_883	RY70_684	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.509
guaA_1	rpsI_1	RY70_883	RY70_1713	GMP synthase; Catalyzes the synthesis of GMP from XMP.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.599
guaA_1	typA	RY70_883	RY70_696	GMP synthase; Catalyzes the synthesis of GMP from XMP.	GTP-binding protein.	0.609
infC	TrmD	RY70_684	RY70_402	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	tRNA (Guanine37-N1)-methyltransferase.	0.457
infC	guaA_1	RY70_684	RY70_883	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.509
infC	rpsI_1	RY70_684	RY70_1713	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.938
infC	typA	RY70_684	RY70_696	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	GTP-binding protein.	0.519
nfo	relA	RY70_1154	RY70_1376	Putative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.	GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.	0.541

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