Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RY70_779ABC transporter ATP-binding protein. (262 aa)    
Predicted Functional Partners:
BioY
Transmembranal protein.
 
  
 0.884
LolD
ABC transporter ATP-binding protein.
 
    0.757
RY70_1611
ABC transporter.
 
    0.749
YbbL
Putative ABC transporter ATP-binding protein.
  
     0.742
MacB-2
ABC-type antimicrobial peptide transport system protein.
 
    0.716
ftsH
Cell division cycle protein; Belongs to the AAA ATPase family.
  
 
   0.690
RY70_773
Putative ABC transporter ATP-binding protein.
 
  
0.665
macB_8
ATP binding protein of ABC transporter.
 
    0.605
RY70_780
Arylsulfate sulfo transferase.
  
    0.578
troB
ATP binding protein of ABC transporter.
 
    0.568
Your Current Organism:
Bifidobacterium bifidum
NCBI taxonomy Id: 1681
Other names: AS 1.2212, ATCC 29521, Actinobacterium bifidum, Actinomyces bifidus, Actinomyces parabifidus, B. bifidum, BCRC 14615, Bacillus bifidus, Bacillus bifidus communis, Bacterium bifidum, Bacteroides bifidus, Bifidibacterium bifidum, CCRC 14615, CCRC:14615, CCUG 18364, CCUG 45217, CIP 56.7, Cohnistreptothrix bifidus, DSM 20456, IFO 14252, KCTC 3202, LMG 11041, LMG 8810, LMG:11041, LMG:8810, Lactobacillus bifidus type II, Lactobacillus parabifidus, NBRC 100015, NBRC 14252, NCFB 2715, NCIMB 702715, NCTC 13001, Nocardia bifida, Tissieria bifida, strain Ti
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.