Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RY70_556 | gppA | RY70_556 | RY70_822 | Hypothetical protein. | Exopolyphosphatase. | 0.536 |
RY70_820 | RY70_821 | RY70_820 | RY70_821 | Septum formation initiator. | Hypothetical protein. | 0.793 |
RY70_820 | SdaA | RY70_820 | RY70_825 | Septum formation initiator. | L-serine ammonia-lyase. | 0.447 |
RY70_820 | eno | RY70_820 | RY70_819 | Septum formation initiator. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.708 |
RY70_820 | gppA | RY70_820 | RY70_822 | Septum formation initiator. | Exopolyphosphatase. | 0.625 |
RY70_821 | RY70_820 | RY70_821 | RY70_820 | Hypothetical protein. | Septum formation initiator. | 0.793 |
RY70_821 | SdaA | RY70_821 | RY70_825 | Hypothetical protein. | L-serine ammonia-lyase. | 0.478 |
RY70_821 | eno | RY70_821 | RY70_819 | Hypothetical protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.672 |
RY70_821 | gppA | RY70_821 | RY70_822 | Hypothetical protein. | Exopolyphosphatase. | 0.974 |
RY70_821 | ppk | RY70_821 | RY70_1920 | Hypothetical protein. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.493 |
SdaA | RY70_820 | RY70_825 | RY70_820 | L-serine ammonia-lyase. | Septum formation initiator. | 0.447 |
SdaA | RY70_821 | RY70_825 | RY70_821 | L-serine ammonia-lyase. | Hypothetical protein. | 0.478 |
SdaA | gppA | RY70_825 | RY70_822 | L-serine ammonia-lyase. | Exopolyphosphatase. | 0.527 |
aroB | gppA | RY70_926 | RY70_822 | Bifunctional shikimate kinase-3-dehydroquinate synthase protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. | Exopolyphosphatase. | 0.900 |
eno | RY70_820 | RY70_819 | RY70_820 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Septum formation initiator. | 0.708 |
eno | RY70_821 | RY70_819 | RY70_821 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Hypothetical protein. | 0.672 |
eno | gppA | RY70_819 | RY70_822 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Exopolyphosphatase. | 0.586 |
gppA | RY70_556 | RY70_822 | RY70_556 | Exopolyphosphatase. | Hypothetical protein. | 0.536 |
gppA | RY70_820 | RY70_822 | RY70_820 | Exopolyphosphatase. | Septum formation initiator. | 0.625 |
gppA | RY70_821 | RY70_822 | RY70_821 | Exopolyphosphatase. | Hypothetical protein. | 0.974 |
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