Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC63679.1 | SDC63750.1 | SAMN05444580_101455 | SAMN05444580_101457 | Putative hydrolase/uncharacterized protein, coenzyme F420 biosynthesis associated. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.931 |
SDC63679.1 | SDC63787.1 | SAMN05444580_101455 | SAMN05444580_101458 | Putative hydrolase/uncharacterized protein, coenzyme F420 biosynthesis associated. | Amidase. | 0.753 |
SDC63679.1 | tilS | SAMN05444580_101455 | SAMN05444580_101456 | Putative hydrolase/uncharacterized protein, coenzyme F420 biosynthesis associated. | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.934 |
SDC63750.1 | SDC63679.1 | SAMN05444580_101457 | SAMN05444580_101455 | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Putative hydrolase/uncharacterized protein, coenzyme F420 biosynthesis associated. | 0.931 |
SDC63750.1 | SDC63787.1 | SAMN05444580_101457 | SAMN05444580_101458 | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Amidase. | 0.770 |
SDC63750.1 | tilS | SAMN05444580_101457 | SAMN05444580_101456 | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.995 |
SDC63787.1 | SDC63679.1 | SAMN05444580_101458 | SAMN05444580_101455 | Amidase. | Putative hydrolase/uncharacterized protein, coenzyme F420 biosynthesis associated. | 0.753 |
SDC63787.1 | SDC63750.1 | SAMN05444580_101458 | SAMN05444580_101457 | Amidase. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.770 |
SDC63787.1 | SDC93139.1 | SAMN05444580_101458 | SAMN05444580_102117 | Amidase. | Allophanate hydrolase/urea carboxylase. | 0.763 |
SDC63787.1 | SDD58646.1 | SAMN05444580_101458 | SAMN05444580_105182 | Amidase. | Urea carboxylase. | 0.750 |
SDC63787.1 | SDE43862.1 | SAMN05444580_101458 | SAMN05444580_11751 | Amidase. | Acylphosphatase. | 0.807 |
SDC63787.1 | gatB | SAMN05444580_101458 | SAMN05444580_106190 | Amidase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.987 |
SDC63787.1 | gatC | SAMN05444580_101458 | SAMN05444580_106198 | Amidase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.962 |
SDC63787.1 | gltX | SAMN05444580_101458 | SAMN05444580_106166 | Amidase. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.807 |
SDC63787.1 | gluQ | SAMN05444580_101458 | SAMN05444580_101285 | Amidase. | glutamyl-tRNA synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. | 0.782 |
SDC63787.1 | tilS | SAMN05444580_101458 | SAMN05444580_101456 | Amidase. | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.803 |
SDC93139.1 | SDC63787.1 | SAMN05444580_102117 | SAMN05444580_101458 | Allophanate hydrolase/urea carboxylase. | Amidase. | 0.763 |
SDC93139.1 | SDD58646.1 | SAMN05444580_102117 | SAMN05444580_105182 | Allophanate hydrolase/urea carboxylase. | Urea carboxylase. | 0.999 |
SDD58646.1 | SDC63787.1 | SAMN05444580_105182 | SAMN05444580_101458 | Urea carboxylase. | Amidase. | 0.750 |
SDD58646.1 | SDC93139.1 | SAMN05444580_105182 | SAMN05444580_102117 | Urea carboxylase. | Allophanate hydrolase/urea carboxylase. | 0.999 |
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