STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC66683.1Hypothetical protein. (369 aa)    
Predicted Functional Partners:
SDC66726.1
Hypothetical protein.
  
 0.998
SDC66797.1
MaoC like domain-containing protein.
 
 
 0.965
SDC66835.1
Acetyl-CoA acetyltransferase.
 
 
 0.951
SDC66762.1
Hypothetical protein.
 
  
  0.941
SDC66650.1
Hypothetical protein.
 
    
0.880
SDD77195.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 
 0.862
SDD77233.1
Electron transfer flavoprotein beta subunit.
 
 
 0.857
SDC66620.1
DNA-binding transcriptional regulator, AcrR family.
 
   
 0.820
SDC68852.1
acyl-CoA dehydrogenase/hypothetical protein.
 
   
 0.814
SDD13558.1
Hypothetical protein.
 
   
 0.813
Your Current Organism:
Rhodococcus tukisamuensis
NCBI taxonomy Id: 168276
Other names: JCM 11308, NBRC 100609, NCIMB 13903, R. tukisamuensis, Rhodococcus tukisamuensis Matsuyama et al. 2003, strain Mb8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.