node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC75521.1 | SDC75557.1 | SAMN05444580_101797 | SAMN05444580_101798 | DNA-binding transcriptional regulator, MarR family. | tRNA G18 (ribose-2'-O)-methylase SpoU. | 0.772 |
SDC75521.1 | SDC75605.1 | SAMN05444580_101797 | SAMN05444580_101799 | DNA-binding transcriptional regulator, MarR family. | Protein of unknown function. | 0.767 |
SDC75557.1 | SDC75521.1 | SAMN05444580_101798 | SAMN05444580_101797 | tRNA G18 (ribose-2'-O)-methylase SpoU. | DNA-binding transcriptional regulator, MarR family. | 0.772 |
SDC75557.1 | SDC75605.1 | SAMN05444580_101798 | SAMN05444580_101799 | tRNA G18 (ribose-2'-O)-methylase SpoU. | Protein of unknown function. | 0.879 |
SDC75557.1 | rplC | SAMN05444580_101798 | SAMN05444580_11448 | tRNA G18 (ribose-2'-O)-methylase SpoU. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.818 |
SDC75557.1 | rplK | SAMN05444580_101798 | SAMN05444580_109134 | tRNA G18 (ribose-2'-O)-methylase SpoU. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.825 |
SDC75557.1 | rplM | SAMN05444580_101798 | SAMN05444580_1234 | tRNA G18 (ribose-2'-O)-methylase SpoU. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.823 |
SDC75557.1 | rplO | SAMN05444580_101798 | SAMN05444580_11429 | tRNA G18 (ribose-2'-O)-methylase SpoU. | Large subunit ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.852 |
SDC75557.1 | rplQ | SAMN05444580_101798 | SAMN05444580_11417 | tRNA G18 (ribose-2'-O)-methylase SpoU. | Large subunit ribosomal protein L17. | 0.836 |
SDC75557.1 | rplU | SAMN05444580_101798 | SAMN05444580_11013 | tRNA G18 (ribose-2'-O)-methylase SpoU. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.836 |
SDC75557.1 | rplX | SAMN05444580_101798 | SAMN05444580_11437 | tRNA G18 (ribose-2'-O)-methylase SpoU. | Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.819 |
SDC75557.1 | rsfS | SAMN05444580_101798 | SAMN05444580_11782 | tRNA G18 (ribose-2'-O)-methylase SpoU. | Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.842 |
SDC75605.1 | SDC75521.1 | SAMN05444580_101799 | SAMN05444580_101797 | Protein of unknown function. | DNA-binding transcriptional regulator, MarR family. | 0.767 |
SDC75605.1 | SDC75557.1 | SAMN05444580_101799 | SAMN05444580_101798 | Protein of unknown function. | tRNA G18 (ribose-2'-O)-methylase SpoU. | 0.879 |
rplC | SDC75557.1 | SAMN05444580_11448 | SAMN05444580_101798 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | tRNA G18 (ribose-2'-O)-methylase SpoU. | 0.818 |
rplC | rplK | SAMN05444580_11448 | SAMN05444580_109134 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.998 |
rplC | rplM | SAMN05444580_11448 | SAMN05444580_1234 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplC | rplO | SAMN05444580_11448 | SAMN05444580_11429 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
rplC | rplQ | SAMN05444580_11448 | SAMN05444580_11417 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Large subunit ribosomal protein L17. | 0.998 |
rplC | rplU | SAMN05444580_11448 | SAMN05444580_11013 | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.995 |