STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC96476.1Hypothetical protein. (240 aa)    
Predicted Functional Partners:
SDE44633.1
GDSL-like Lipase/Acylhydrolase family protein.
  
     0.767
SDE60829.1
Hypothetical protein.
  
     0.749
SDE27455.1
Hypothetical protein.
  
     0.741
SDC96443.1
Hypothetical protein.
       0.712
SDE30303.1
Type VII secretion-associated protein, Rv3446c family, C-terminal domain-containing protein.
  
   0.711
SDE52764.1
Hypothetical protein.
  
 
  0.699
SDE12291.1
Fatty acid synthase.
  
 
 0.663
SDD77275.1
1,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 57 family.
  
     0.646
SDE32573.1
Amino acid adenylation domain-containing protein.
   
 0.645
SDD90318.1
PQQ-like domain-containing protein.
  
  
  0.641
Your Current Organism:
Rhodococcus tukisamuensis
NCBI taxonomy Id: 168276
Other names: JCM 11308, NBRC 100609, NCIMB 13903, R. tukisamuensis, Rhodococcus tukisamuensis Matsuyama et al. 2003, strain Mb8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.