Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD00419.1 | SDD00449.1 | SAMN05444580_102361 | SAMN05444580_102362 | VanZ like family protein. | Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family. | 0.791 |
SDD00419.1 | SDD04845.1 | SAMN05444580_102361 | SAMN05444580_102496 | VanZ like family protein. | Protein of unknown function. | 0.544 |
SDD00419.1 | SDD14184.1 | SAMN05444580_102361 | SAMN05444580_10380 | VanZ like family protein. | Hypothetical protein. | 0.618 |
SDD00419.1 | SDD87253.1 | SAMN05444580_102361 | SAMN05444580_10798 | VanZ like family protein. | Hypothetical protein. | 0.402 |
SDD00419.1 | SDD87286.1 | SAMN05444580_102361 | SAMN05444580_10799 | VanZ like family protein. | Protein of unknown function. | 0.547 |
SDD00419.1 | SDE17432.1 | SAMN05444580_102361 | SAMN05444580_11189 | VanZ like family protein. | Hypothetical protein. | 0.658 |
SDD00419.1 | pnp | SAMN05444580_102361 | SAMN05444580_102363 | VanZ like family protein. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.474 |
SDD00449.1 | SDD00419.1 | SAMN05444580_102362 | SAMN05444580_102361 | Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family. | VanZ like family protein. | 0.791 |
SDD00449.1 | pnp | SAMN05444580_102362 | SAMN05444580_102363 | Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.891 |
SDD04845.1 | SDD00419.1 | SAMN05444580_102496 | SAMN05444580_102361 | Protein of unknown function. | VanZ like family protein. | 0.544 |
SDD14184.1 | SDD00419.1 | SAMN05444580_10380 | SAMN05444580_102361 | Hypothetical protein. | VanZ like family protein. | 0.618 |
SDD14184.1 | SDE17432.1 | SAMN05444580_10380 | SAMN05444580_11189 | Hypothetical protein. | Hypothetical protein. | 0.550 |
SDD87253.1 | SDD00419.1 | SAMN05444580_10798 | SAMN05444580_102361 | Hypothetical protein. | VanZ like family protein. | 0.402 |
SDD87253.1 | SDD87286.1 | SAMN05444580_10798 | SAMN05444580_10799 | Hypothetical protein. | Protein of unknown function. | 0.828 |
SDD87286.1 | SDD00419.1 | SAMN05444580_10799 | SAMN05444580_102361 | Protein of unknown function. | VanZ like family protein. | 0.547 |
SDD87286.1 | SDD87253.1 | SAMN05444580_10799 | SAMN05444580_10798 | Protein of unknown function. | Hypothetical protein. | 0.828 |
SDE17432.1 | SDD00419.1 | SAMN05444580_11189 | SAMN05444580_102361 | Hypothetical protein. | VanZ like family protein. | 0.658 |
SDE17432.1 | SDD14184.1 | SAMN05444580_11189 | SAMN05444580_10380 | Hypothetical protein. | Hypothetical protein. | 0.550 |
pnp | SDD00419.1 | SAMN05444580_102363 | SAMN05444580_102361 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | VanZ like family protein. | 0.474 |
pnp | SDD00449.1 | SAMN05444580_102363 | SAMN05444580_102362 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family. | 0.891 |