STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD21868.1Hypothetical protein. (198 aa)    
Predicted Functional Partners:
SDD21843.1
Histidine ammonia-lyase.
  
  
 0.776
SDD13107.1
SnoaL-like domain-containing protein.
  
     0.723
SDD44779.1
Type III restriction enzyme, res subunit.
  
     0.708
SDD22986.1
Nucleoside-diphosphate-sugar epimerase.
  
     0.702
SDD03356.1
Hypothetical protein.
  
     0.659
SDC48112.1
Ig-like domain (group 3).
  
     0.656
SDC61088.1
Ig-like domain (group 3).
  
     0.649
SDD19214.1
Ig-like domain (group 3).
  
     0.642
SDC80480.1
Ig-like domain (group 3).
  
     0.641
SDE17178.1
SEC-C motif-containing protein.
  
     0.629
Your Current Organism:
Rhodococcus tukisamuensis
NCBI taxonomy Id: 168276
Other names: JCM 11308, NBRC 100609, NCIMB 13903, R. tukisamuensis, Rhodococcus tukisamuensis Matsuyama et al. 2003, strain Mb8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.