STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD26474.1Hypothetical protein. (208 aa)    
Predicted Functional Partners:
SDE50437.1
DNA binding domain-containing protein, excisionase family.
  
     0.751
SDE11953.1
Protein of unknown function.
  
     0.671
SDE55867.1
Hypothetical protein.
  
     0.553
SDC64112.1
Hypothetical protein.
  
     0.552
SDD77448.1
Hypothetical protein.
  
     0.536
SDC75605.1
Protein of unknown function.
  
     0.530
SDE40937.1
DivIVA domain-containing protein.
  
     0.529
SDC53928.1
Hypothetical protein.
  
     0.526
SDD85969.1
Hypothetical protein.
  
     0.522
SDD60389.1
Protein of unknown function.
  
     0.507
Your Current Organism:
Rhodococcus tukisamuensis
NCBI taxonomy Id: 168276
Other names: JCM 11308, NBRC 100609, NCIMB 13903, R. tukisamuensis, Rhodococcus tukisamuensis Matsuyama et al. 2003, strain Mb8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.