Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD33956.1 | SDD35333.1 | SAMN05444580_1045 | SAMN05444580_10444 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Hypothetical protein. | 0.913 |
SDD33956.1 | SDD36179.1 | SAMN05444580_1045 | SAMN05444580_10469 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | 0.538 |
SDD33956.1 | SDD54529.1 | SAMN05444580_1045 | SAMN05444580_10556 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.823 |
SDD33956.1 | atpA | SAMN05444580_1045 | SAMN05444580_11883 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.661 |
SDD33956.1 | atpD | SAMN05444580_1045 | SAMN05444580_11885 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.557 |
SDD33956.1 | rplK | SAMN05444580_1045 | SAMN05444580_109134 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.776 |
SDD33956.1 | rplQ | SAMN05444580_1045 | SAMN05444580_11417 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Large subunit ribosomal protein L17. | 0.906 |
SDD33956.1 | rpmA | SAMN05444580_1045 | SAMN05444580_11012 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.912 |
SDD33956.1 | rpmG | SAMN05444580_1045 | SAMN05444580_101912 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Large subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.906 |
SDD35333.1 | SDD33956.1 | SAMN05444580_10444 | SAMN05444580_1045 | Hypothetical protein. | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.913 |
SDD35333.1 | SDD36179.1 | SAMN05444580_10444 | SAMN05444580_10469 | Hypothetical protein. | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | 0.541 |
SDD35333.1 | SDD54529.1 | SAMN05444580_10444 | SAMN05444580_10556 | Hypothetical protein. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.778 |
SDD35333.1 | rplK | SAMN05444580_10444 | SAMN05444580_109134 | Hypothetical protein. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.909 |
SDD35333.1 | rplQ | SAMN05444580_10444 | SAMN05444580_11417 | Hypothetical protein. | Large subunit ribosomal protein L17. | 0.915 |
SDD35333.1 | rpmA | SAMN05444580_10444 | SAMN05444580_11012 | Hypothetical protein. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.919 |
SDD35333.1 | rpmG | SAMN05444580_10444 | SAMN05444580_101912 | Hypothetical protein. | Large subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.910 |
SDD36179.1 | SDD33956.1 | SAMN05444580_10469 | SAMN05444580_1045 | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.538 |
SDD36179.1 | SDD35333.1 | SAMN05444580_10469 | SAMN05444580_10444 | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | Hypothetical protein. | 0.541 |
SDD36179.1 | SDD54529.1 | SAMN05444580_10469 | SAMN05444580_10556 | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.538 |
SDD36179.1 | atpA | SAMN05444580_10469 | SAMN05444580_11883 | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.662 |
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