STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD72457.1Uncharacterized SAM-binding protein YcdF, DUF218 family. (225 aa)    
Predicted Functional Partners:
SDD72415.1
dGTPase; Belongs to the dGTPase family. Type 2 subfamily.
  
    0.883
SDD72493.1
TLP18.3, Psb32 and MOLO-1 founding protein of phosphatase.
       0.786
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
       0.590
SDE53614.1
DUF218 domain-containing protein.
  
     0.585
SDE12291.1
Fatty acid synthase.
  
    0.582
SDE13165.1
Hypothetical protein.
  
     0.466
SDD72531.1
Acetyl esterase.
       0.431
SDC49294.1
RecB family nuclease, putative, TM0106 family.
  
     0.428
SDD15063.1
Hypothetical protein.
  
     0.421
SDC93938.1
Hypothetical protein.
  
     0.412
Your Current Organism:
Rhodococcus tukisamuensis
NCBI taxonomy Id: 168276
Other names: JCM 11308, NBRC 100609, NCIMB 13903, R. tukisamuensis, Rhodococcus tukisamuensis Matsuyama et al. 2003, strain Mb8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.