STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE10459.1Glutamate dehydrogenase. (1645 aa)    
Predicted Functional Partners:
SDE64209.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.935
SDD46861.1
FHA domain-containing protein.
    
 
 0.932
SDE10427.1
acyl-CoA thioester hydrolase.
  
    0.931
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.918
SDE28472.1
Glutamine synthetase.
     
 0.918
SDE28874.1
Glutamine synthetase.
     
 0.914
SDD34345.1
Glutamine synthetase.
     
 0.913
SDC75893.1
Citrate synthase; Belongs to the citrate synthase family.
     
 0.910
SDD44814.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.905
SDC76075.1
Citrate synthase; Belongs to the citrate synthase family.
     
 0.899
Your Current Organism:
Rhodococcus tukisamuensis
NCBI taxonomy Id: 168276
Other names: JCM 11308, NBRC 100609, NCIMB 13903, R. tukisamuensis, Rhodococcus tukisamuensis Matsuyama et al. 2003, strain Mb8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.