STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE11071.1Ferredoxin-NADP reductase. (365 aa)    
Predicted Functional Partners:
SDE11007.1
linoleoyl-CoA desaturase.
 
 0.996
SDD89493.1
Fatty acid desaturase.
 
 0.988
SDD89522.1
linoleoyl-CoA desaturase.
 
 0.988
SDE46253.1
Unspecific monooxygenase; Belongs to the cytochrome P450 family.
  
 0.979
SDE11855.1
Fatty acid desaturase.
 
 0.965
SDE17519.1
Sulfite reductase [NADPH] flavoprotein, alpha-component; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.932
SDD77093.1
Cysteine desulfurase.
  
 0.910
SDD89464.1
Ferredoxin-NADP reductase.
 
  
0.907
SDE11099.1
DNA-binding transcriptional regulator, AcrR family.
 
   
 0.905
SDE62846.1
Nitrogen fixation protein NifU.
  
 0.902
Your Current Organism:
Rhodococcus tukisamuensis
NCBI taxonomy Id: 168276
Other names: JCM 11308, NBRC 100609, NCIMB 13903, R. tukisamuensis, Rhodococcus tukisamuensis Matsuyama et al. 2003, strain Mb8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.