STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE30271.1WXG100 family type VII secretion target; Belongs to the WXG100 family. (104 aa)    
Predicted Functional Partners:
SDE30233.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
 
 
0.999
SDE30334.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
 
 
 
 0.987
SDC99980.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.912
SDE30398.1
Membrane-anchored mycosin MYCP; Belongs to the peptidase S8 family.
  
  
 0.672
SDE30303.1
Type VII secretion-associated protein, Rv3446c family, C-terminal domain-containing protein.
     
 0.600
SDC53847.1
Polyketide synthase 13.
    
 
 0.472
SDC48944.1
Polyketide cyclase / dehydrase and lipid transport.
  
     0.427
SDD38411.1
Hypothetical protein.
  
     0.408
Your Current Organism:
Rhodococcus tukisamuensis
NCBI taxonomy Id: 168276
Other names: JCM 11308, NBRC 100609, NCIMB 13903, R. tukisamuensis, Rhodococcus tukisamuensis Matsuyama et al. 2003, strain Mb8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.