STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE30367.1Type VII secretion integral membrane protein EccD. (494 aa)    
Predicted Functional Partners:
SDE30334.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
 
 
 
 0.999
SDE30425.1
Type VII secretion protein EccB.
  
 
 
 0.998
SDE30398.1
Membrane-anchored mycosin MYCP; Belongs to the peptidase S8 family.
 
 
 0.991
SDC99980.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.908
SDD60576.1
Hypothetical protein.
  
 
 
 0.852
SDD27202.1
Hypothetical protein.
  
 
 
 0.748
SDE30458.1
Type VII secretion protein EccE.
  
     0.746
SDD94135.1
Ig-like domain (group 3).
  
 
 
 0.740
SDD36568.1
TIGR02677 family protein.
  
 
 
 0.737
SDD40417.1
Protein of unknown function.
  
 
 
 0.730
Your Current Organism:
Rhodococcus tukisamuensis
NCBI taxonomy Id: 168276
Other names: JCM 11308, NBRC 100609, NCIMB 13903, R. tukisamuensis, Rhodococcus tukisamuensis Matsuyama et al. 2003, strain Mb8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.