STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE34998.1Uncharacterized conserved protein PhnB, glyoxalase superfamily. (139 aa)    
Predicted Functional Partners:
SDE35045.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
  
  0.694
SDC93668.1
Glyoxylase, beta-lactamase superfamily II.
  
 
  0.691
SDC76994.1
Aldo/keto reductase.
  
 
  0.667
trpA
Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
    
  0.617
SDD44572.1
Conserved hypothetical protein, steroid delta-isomerase-related.
    
  0.615
SDD21726.1
D-serine deaminase, pyridoxal phosphate-dependent.
   
 
  0.602
SDE39103.1
D-serine deaminase, pyridoxal phosphate-dependent.
   
 
  0.602
SDD75880.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.589
SDE38776.1
D-3-phosphoglycerate dehydrogenase.
    
  0.589
SDD90636.1
Adenylyltransferase and sulfurtransferase.
  
 
  0.568
Your Current Organism:
Rhodococcus tukisamuensis
NCBI taxonomy Id: 168276
Other names: JCM 11308, NBRC 100609, NCIMB 13903, R. tukisamuensis, Rhodococcus tukisamuensis Matsuyama et al. 2003, strain Mb8
Server load: low (22%) [HD]