STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE40875.1Protein of unknown function. (55 aa)    
Predicted Functional Partners:
SDE40903.1
DNA-3-methyladenine glycosylase I.
     
 0.839
SDE40844.1
23S rRNA (guanine745-N1)-methyltransferase.
       0.771
SDC61492.1
Protein of unknown function.
  
     0.770
SDE40937.1
DivIVA domain-containing protein.
       0.762
SDE40971.1
Glucosyl-3-phosphoglycerate synthase.
       0.711
SDE41005.1
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.711
SDD47821.1
Hypothetical protein.
  
     0.569
SDC62253.1
Tight adherence protein B.
  
     0.517
SDC75712.1
Protein of unknown function.
  
    0.424
SDE41059.1
Hypothetical protein; Belongs to the LOG family.
       0.416
Your Current Organism:
Rhodococcus tukisamuensis
NCBI taxonomy Id: 168276
Other names: JCM 11308, NBRC 100609, NCIMB 13903, R. tukisamuensis, Rhodococcus tukisamuensis Matsuyama et al. 2003, strain Mb8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.