STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE43949.1Alanine or glycine:cation symporter, AGCS family. (485 aa)    
Predicted Functional Partners:
SDE43923.1
Uncharacterized OsmC-related protein.
       0.782
SDE43862.1
Acylphosphatase.
       0.776
SDE43892.1
SMP-30/Gluconolaconase/LRE-like region-containing protein.
  
    0.759
SDE43816.1
Glutathionylspermidine synthase.
       0.604
SDE43840.1
Hypothetical protein.
       0.604
SDE43790.1
Protein of unknown function.
       0.517
SDC59967.1
H+/Cl-antiporter ClcA.
   
    0.479
SDE58524.1
H+/Cl-antiporter ClcA.
   
    0.479
SDD57635.1
CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.474
SDE43976.1
Two-component system, OmpR family, KDP operon response regulator KdpE.
       0.463
Your Current Organism:
Rhodococcus tukisamuensis
NCBI taxonomy Id: 168276
Other names: JCM 11308, NBRC 100609, NCIMB 13903, R. tukisamuensis, Rhodococcus tukisamuensis Matsuyama et al. 2003, strain Mb8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.