Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF14778.1 | SDF14870.1 | SAMN05660368_00193 | SAMN05660368_00195 | Rod shape determining protein RodA; Belongs to the SEDS family. | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.766 |
SDF14778.1 | SDF14909.1 | SAMN05660368_00193 | SAMN05660368_00196 | Rod shape determining protein RodA; Belongs to the SEDS family. | Hypothetical protein. | 0.652 |
SDF14778.1 | SDF14953.1 | SAMN05660368_00193 | SAMN05660368_00197 | Rod shape determining protein RodA; Belongs to the SEDS family. | Hypothetical protein. | 0.569 |
SDF14778.1 | SDF14990.1 | SAMN05660368_00193 | SAMN05660368_00198 | Rod shape determining protein RodA; Belongs to the SEDS family. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.413 |
SDF14778.1 | dnaN | SAMN05660368_00193 | SAMN05660368_03470 | Rod shape determining protein RodA; Belongs to the SEDS family. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.500 |
SDF14778.1 | mgsA | SAMN05660368_00193 | SAMN05660368_00194 | Rod shape determining protein RodA; Belongs to the SEDS family. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.714 |
SDF14870.1 | SDF14778.1 | SAMN05660368_00195 | SAMN05660368_00193 | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Rod shape determining protein RodA; Belongs to the SEDS family. | 0.766 |
SDF14870.1 | SDF14909.1 | SAMN05660368_00195 | SAMN05660368_00196 | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Hypothetical protein. | 0.651 |
SDF14870.1 | mgsA | SAMN05660368_00195 | SAMN05660368_00194 | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.782 |
SDF14909.1 | SDF14778.1 | SAMN05660368_00196 | SAMN05660368_00193 | Hypothetical protein. | Rod shape determining protein RodA; Belongs to the SEDS family. | 0.652 |
SDF14909.1 | SDF14870.1 | SAMN05660368_00196 | SAMN05660368_00195 | Hypothetical protein. | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.651 |
SDF14909.1 | SDF14953.1 | SAMN05660368_00196 | SAMN05660368_00197 | Hypothetical protein. | Hypothetical protein. | 0.695 |
SDF14909.1 | SDF14990.1 | SAMN05660368_00196 | SAMN05660368_00198 | Hypothetical protein. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.577 |
SDF14909.1 | SDF77286.1 | SAMN05660368_00196 | SAMN05660368_01270 | Hypothetical protein. | PD-(D/E)XK nuclease family transposase. | 0.641 |
SDF14909.1 | SDF83261.1 | SAMN05660368_00196 | SAMN05660368_01423 | Hypothetical protein. | Hybrid cluster protein-associated redox disulfide domain-containing protein. | 0.605 |
SDF14909.1 | SDG55858.1 | SAMN05660368_00196 | SAMN05660368_02800 | Hypothetical protein. | DNA replication protein DnaC. | 0.664 |
SDF14909.1 | dnaB | SAMN05660368_00196 | SAMN05660368_01744 | Hypothetical protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.822 |
SDF14909.1 | dnaN | SAMN05660368_00196 | SAMN05660368_03470 | Hypothetical protein. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.967 |
SDF14909.1 | mgsA | SAMN05660368_00196 | SAMN05660368_00194 | Hypothetical protein. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.636 |
SDF14953.1 | SDF14778.1 | SAMN05660368_00197 | SAMN05660368_00193 | Hypothetical protein. | Rod shape determining protein RodA; Belongs to the SEDS family. | 0.569 |
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