STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF70572.1Putative ABC transport system permease protein. (892 aa)    
Predicted Functional Partners:
SDF70539.1
Putative ABC transport system ATP-binding protein.
 
   0.969
SDF70488.1
Signal transduction histidine kinase.
 
     0.879
SDF32014.1
Putative ABC transport system ATP-binding protein.
 
   0.853
SDG44153.1
Putative ABC transport system ATP-binding protein.
 
   0.822
SDF20049.1
Putative ABC transport system ATP-binding protein.
 
   0.816
SDF88822.1
Putative ABC transport system ATP-binding protein.
 
   0.793
SDF88702.1
Putative ABC transport system ATP-binding protein.
 
   0.788
SDF67977.1
Putative ABC transport system ATP-binding protein.
 
   0.776
SDF31969.1
Signal transduction histidine kinase.
 
    0.755
SDF70170.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
     0.741
Your Current Organism:
Marvinbryantia formatexigens
NCBI taxonomy Id: 168384
Other names: Bryantella formatexigens, Bryantella formatexigens Wolin et al. 2004, CCUG 46960, DSM 14469, M. formatexigens, Marvinbryantia formatexigens (Wolin et al. 2004) Wolin et al. 2008, strain I-52
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.