STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF72595.1Two-component system, sensor histidine kinase YesM. (601 aa)    
Predicted Functional Partners:
SDF72633.1
Two-component system, response regulator YesN.
 
  0.958
SDF77527.1
Two-component system, response regulator YesN.
  
 
  0.890
SDF99258.1
Response regulator receiver domain protein; Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains.
 
 
  0.878
SDF72675.1
Multiple sugar transport system substrate-binding protein.
 
     0.804
SDG41042.1
Two-component system, response regulator YesN.
 
 
  0.773
SDF71588.1
Two component transcriptional regulator, LytTR family.
  
 
  0.765
SDG86915.1
Two component transcriptional regulator, LytTR family.
  
 
  0.747
SDG75522.1
Two-component system, response regulator YesN.
  
  
  0.741
SDG41384.1
Two-component system, response regulator YesN.
  
 
  0.733
SDG47013.1
Two component transcriptional regulator, LytTR family.
  
 
  0.722
Your Current Organism:
Marvinbryantia formatexigens
NCBI taxonomy Id: 168384
Other names: Bryantella formatexigens, Bryantella formatexigens Wolin et al. 2004, CCUG 46960, DSM 14469, M. formatexigens, Marvinbryantia formatexigens (Wolin et al. 2004) Wolin et al. 2008, strain I-52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.