STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF91481.1Fibronectin type III domain-containing protein. (423 aa)    
Predicted Functional Partners:
SDF68810.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
 0.845
SDG70429.1
Putative peptidoglycan-binding domain-containing protein.
 
 
  0.774
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.762
SDH39502.1
Calcineurin-like phosphoesterase.
    
  0.756
SDG47383.1
Purple acid Phosphatase, N-terminal domain.
    
  0.753
SDG63742.1
Tape measure domain-containing protein.
  
 
  0.738
SDF07354.1
Serine protease AprX.
    
  0.735
SDF13933.1
Protein of unknown function.
    
  0.735
SDF57014.1
Hypothetical protein.
    
  0.735
SDF77359.1
Protein of unknown function.
    
  0.735
Your Current Organism:
Marvinbryantia formatexigens
NCBI taxonomy Id: 168384
Other names: Bryantella formatexigens, Bryantella formatexigens Wolin et al. 2004, CCUG 46960, DSM 14469, M. formatexigens, Marvinbryantia formatexigens (Wolin et al. 2004) Wolin et al. 2008, strain I-52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.