STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG06943.1Copper chaperone CopZ. (120 aa)    
Predicted Functional Partners:
sodC
Superoxide dismutase, Cu-Zn family.
   
 0.990
SDG12334.1
Cu2+-exporting ATPase.
  
 
 0.857
SDF77179.1
Predicted transcriptional regulator.
  
  
 0.789
SDG06878.1
Virus attachment protein p12 family.
       0.752
SDG06911.1
Hypothetical protein.
       0.752
SDF39852.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase.
 
 
 0.748
cadA
Cd2+/Zn2+-exporting ATPase.
  
 
 0.708
SDF16061.1
Heavy-metal-associated domain-containing protein.
  
 
 0.708
cadA-2
Copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase,TIGR01512.
  
 
 0.708
cadA-3
Copper-(or silver)-translocating P-type ATPase.
  
 
 0.708
Your Current Organism:
Marvinbryantia formatexigens
NCBI taxonomy Id: 168384
Other names: Bryantella formatexigens, Bryantella formatexigens Wolin et al. 2004, CCUG 46960, DSM 14469, M. formatexigens, Marvinbryantia formatexigens (Wolin et al. 2004) Wolin et al. 2008, strain I-52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.