STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG17996.1Putative ABC transport system permease protein. (388 aa)    
Predicted Functional Partners:
macB
Putative ABC transport system ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 0.998
SDF34031.1
Putative ABC transport system ATP-binding protein.
 0.992
SDG56210.1
Putative ABC transport system ATP-binding protein.
 0.992
SDG17906.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.991
SDG10228.1
ABC-type lipoprotein export system, ATPase component.
 
  0.973
SDF12419.1
Putative ABC transport system ATP-binding protein.
 
  0.970
SDF31706.1
Putative ABC transport system ATP-binding protein.
 
  0.959
SDF67977.1
Putative ABC transport system ATP-binding protein.
  0.958
SDF70539.1
Putative ABC transport system ATP-binding protein.
  0.958
SDF32014.1
Putative ABC transport system ATP-binding protein.
  0.957
Your Current Organism:
Marvinbryantia formatexigens
NCBI taxonomy Id: 168384
Other names: Bryantella formatexigens, Bryantella formatexigens Wolin et al. 2004, CCUG 46960, DSM 14469, M. formatexigens, Marvinbryantia formatexigens (Wolin et al. 2004) Wolin et al. 2008, strain I-52
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