STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG26246.1Energy-coupling factor transport system substrate-specific component. (205 aa)    
Predicted Functional Partners:
SDG26215.1
Energy-coupling factor transport system permease protein.
 
     0.949
SDG26180.1
Energy-coupling factor transport system ATP-binding protein.
 
     0.948
SDG26285.1
Transcriptional regulator, AraC family.
 
     0.887
SDF53984.1
Energy-coupling factor transport system permease protein.
 
     0.782
SDF51360.1
Energy-coupling factor transport system ATP-binding protein.
 
     0.781
SDF53941.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-).
 
     0.781
SDF51391.1
Energy-coupling factor transport system permease protein.
 
     0.780
SDG27089.1
Energy-coupling factor transport system permease protein.
 
     0.778
SDG27047.1
Energy-coupling factor transport system ATP-binding protein.
 
     0.776
SDF51442.1
Hypothetical integral membrane protein (Trep_Strep).
  
     0.753
Your Current Organism:
Marvinbryantia formatexigens
NCBI taxonomy Id: 168384
Other names: Bryantella formatexigens, Bryantella formatexigens Wolin et al. 2004, CCUG 46960, DSM 14469, M. formatexigens, Marvinbryantia formatexigens (Wolin et al. 2004) Wolin et al. 2008, strain I-52
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