STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG41345.1Two-component system, sensor histidine kinase YesM. (606 aa)    
Predicted Functional Partners:
SDG41384.1
Two-component system, response regulator YesN.
 
 
  0.930
SDF99258.1
Response regulator receiver domain protein; Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains.
  
 
  0.874
SDF77527.1
Two-component system, response regulator YesN.
  
 
  0.836
SDF71588.1
Two component transcriptional regulator, LytTR family.
  
 
  0.791
SDG86915.1
Two component transcriptional regulator, LytTR family.
  
 
  0.789
SDG47013.1
Two component transcriptional regulator, LytTR family.
  
 
  0.767
SDF92892.1
Two component transcriptional regulator, LytTR family.
  
 
  0.763
SDG11230.1
Two component transcriptional regulator, LytTR family.
  
 
  0.763
SDF20824.1
Two component transcriptional regulator, LytTR family.
  
 
  0.750
SDF79414.1
Response regulator receiver domain protein; Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains.
  
 
  0.732
Your Current Organism:
Marvinbryantia formatexigens
NCBI taxonomy Id: 168384
Other names: Bryantella formatexigens, Bryantella formatexigens Wolin et al. 2004, CCUG 46960, DSM 14469, M. formatexigens, Marvinbryantia formatexigens (Wolin et al. 2004) Wolin et al. 2008, strain I-52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.