STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG61082.1N-acetylglucosamine transport system permease protein. (291 aa)    
Predicted Functional Partners:
SDG61011.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
 
  0.989
SDG61050.1
Multiple sugar transport system permease protein.
 
  0.956
SDG41274.1
Multiple sugar transport system permease protein.
 
  0.846
SDH17036.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.813
SDF83064.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
  0.809
SDG32443.1
Multiple sugar transport system permease protein.
 
  0.800
SDH21061.1
Raffinose/stachyose/melibiose transport system permease protein.
  
  0.798
SDG35664.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.792
SDH17598.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
  
  0.781
SDF40952.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.778
Your Current Organism:
Marvinbryantia formatexigens
NCBI taxonomy Id: 168384
Other names: Bryantella formatexigens, Bryantella formatexigens Wolin et al. 2004, CCUG 46960, DSM 14469, M. formatexigens, Marvinbryantia formatexigens (Wolin et al. 2004) Wolin et al. 2008, strain I-52
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