Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF11691.1 | SDF32851.1 | SAMN05660368_00117 | SAMN05660368_00484 | Fumarate hydratase subunit alpha. | Malate dehydrogenase (oxaloacetate-decarboxylating). | 0.919 |
SDF11691.1 | SDG69837.1 | SAMN05660368_00117 | SAMN05660368_03085 | Fumarate hydratase subunit alpha. | Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). | 0.775 |
SDF11691.1 | SDG91025.1 | SAMN05660368_00117 | SAMN05660368_03497 | Fumarate hydratase subunit alpha. | Oxaloacetate decarboxylase, alpha subunit. | 0.884 |
SDF11691.1 | SDG91113.1 | SAMN05660368_00117 | SAMN05660368_03499 | Fumarate hydratase subunit alpha. | Biotin-requiring enzyme. | 0.438 |
SDF11691.1 | ldh | SAMN05660368_00117 | SAMN05660368_00107 | Fumarate hydratase subunit alpha. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.946 |
SDF11691.1 | nifJ | SAMN05660368_00117 | SAMN05660368_01199 | Fumarate hydratase subunit alpha. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.875 |
SDF11691.1 | pckA | SAMN05660368_00117 | SAMN05660368_00815 | Fumarate hydratase subunit alpha. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.873 |
SDF32851.1 | SDF11691.1 | SAMN05660368_00484 | SAMN05660368_00117 | Malate dehydrogenase (oxaloacetate-decarboxylating). | Fumarate hydratase subunit alpha. | 0.919 |
SDF32851.1 | SDG69837.1 | SAMN05660368_00484 | SAMN05660368_03085 | Malate dehydrogenase (oxaloacetate-decarboxylating). | Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). | 0.801 |
SDF32851.1 | SDG91025.1 | SAMN05660368_00484 | SAMN05660368_03497 | Malate dehydrogenase (oxaloacetate-decarboxylating). | Oxaloacetate decarboxylase, alpha subunit. | 0.886 |
SDF32851.1 | SDG91113.1 | SAMN05660368_00484 | SAMN05660368_03499 | Malate dehydrogenase (oxaloacetate-decarboxylating). | Biotin-requiring enzyme. | 0.461 |
SDF32851.1 | ldh | SAMN05660368_00484 | SAMN05660368_00107 | Malate dehydrogenase (oxaloacetate-decarboxylating). | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.938 |
SDF32851.1 | nifJ | SAMN05660368_00484 | SAMN05660368_01199 | Malate dehydrogenase (oxaloacetate-decarboxylating). | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.978 |
SDF32851.1 | pckA | SAMN05660368_00484 | SAMN05660368_00815 | Malate dehydrogenase (oxaloacetate-decarboxylating). | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.498 |
SDF32851.1 | ppdK | SAMN05660368_00484 | SAMN05660368_00715 | Malate dehydrogenase (oxaloacetate-decarboxylating). | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | 0.891 |
SDF32851.1 | pyk | SAMN05660368_00484 | SAMN05660368_03064 | Malate dehydrogenase (oxaloacetate-decarboxylating). | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.969 |
SDG69837.1 | SDF11691.1 | SAMN05660368_03085 | SAMN05660368_00117 | Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). | Fumarate hydratase subunit alpha. | 0.775 |
SDG69837.1 | SDF32851.1 | SAMN05660368_03085 | SAMN05660368_00484 | Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). | Malate dehydrogenase (oxaloacetate-decarboxylating). | 0.801 |
SDG69837.1 | SDG91025.1 | SAMN05660368_03085 | SAMN05660368_03497 | Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). | Oxaloacetate decarboxylase, alpha subunit. | 0.948 |
SDG69837.1 | SDG91113.1 | SAMN05660368_03085 | SAMN05660368_03499 | Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). | Biotin-requiring enzyme. | 0.943 |
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