STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH00918.1NitT/TauT family transport system substrate-binding protein. (333 aa)    
Predicted Functional Partners:
SDF77286.1
PD-(D/E)XK nuclease family transposase.
    
 0.914
SDF23100.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.893
SDF23052.1
NitT/TauT family transport system permease protein.
 
 
 0.889
SDG20436.1
Stage II sporulation protein E.
  
     0.683
SDG24629.1
Stage III sporulation protein AE.
  
     0.638
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.635
SDF13275.1
ATP-dependent protease ClpP, protease subunit.
  
     0.634
SDG24781.1
Stage III sporulation protein AA.
  
     0.634
SDG24745.1
Stage III sporulation protein AB (spore_III_AB).
  
     0.613
spoVAD
Stage V sporulation protein AD.
  
    0.604
Your Current Organism:
Marvinbryantia formatexigens
NCBI taxonomy Id: 168384
Other names: Bryantella formatexigens, Bryantella formatexigens Wolin et al. 2004, CCUG 46960, DSM 14469, M. formatexigens, Marvinbryantia formatexigens (Wolin et al. 2004) Wolin et al. 2008, strain I-52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.