STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH13390.1Multiple sugar transport system permease protein. (278 aa)    
Predicted Functional Partners:
SDH13358.1
Multiple sugar transport system permease protein.
  0.963
SDH13319.1
Multiple sugar transport system substrate-binding protein.
 
   0.882
araP
Arabinosaccharide transport system permease protein.
 
  0.857
SDF80101.1
Multiple sugar transport system permease protein.
 
  0.846
SDF81678.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.846
SDG41627.1
Multiple sugar transport system permease protein.
 
  0.846
SDG73417.1
Multiple sugar transport system permease protein.
 
  0.846
SDG89123.1
Multiple sugar transport system permease protein.
 
  0.845
SDH16780.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.845
SDF79522.1
Multiple sugar transport system permease protein.
 
  0.844
Your Current Organism:
Marvinbryantia formatexigens
NCBI taxonomy Id: 168384
Other names: Bryantella formatexigens, Bryantella formatexigens Wolin et al. 2004, CCUG 46960, DSM 14469, M. formatexigens, Marvinbryantia formatexigens (Wolin et al. 2004) Wolin et al. 2008, strain I-52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.