STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001273905_05195Unannotated protein. (378 aa)    
Predicted Functional Partners:
GCA_001273905_05193
Unannotated protein.
 
 0.998
GCA_001273905_01873
Unannotated protein.
  
 0.986
GCA_001273905_01277
Unannotated protein.
  
 0.985
GCA_001273905_05194
Unannotated protein.
 
 0.951
GCA_001273905_00112
Unannotated protein.
 
 0.905
GCA_001273905_02482
Unannotated protein.
 
 0.898
GCA_001273905_05398
Unannotated protein.
 
 0.898
GCA_001273905_06032
Unannotated protein.
 
 0.888
GCA_001273905_00676
Unannotated protein.
 
 0.886
GCA_001273905_06031
Unannotated protein.
 
 0.883
Your Current Organism:
Paenibacillus sp. FJAT27812
NCBI taxonomy Id: 1684143
Other names: P. sp. FJAT-27812, Paenibacillus sp. FJAT-27812
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.