STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316TWZ1Uncharacterized protein. (696 aa)    
Predicted Functional Partners:
A0A316TX20
Nudix hydrolase domain-containing protein.
    
  0.765
A0A316U580
Putative myosin V; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.713
A0A316UG38
Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
    
  0.708
A0A316U3C5
Regulator of G protein signaling superfamily.
    
 0.700
A0A316UB12
POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.678
A0A316U5X5
Putative GTP-binding protein ypt1.
    
 0.676
A0A316U0S3
Ras-domain-containing protein.
    
 0.646
A0A316TZ14
UBA domain-containing protein.
    
 0.644
A0A316UBT4
DNA repair exonuclease.
    
  0.643
A0A316U622
Putative 26S proteasome non-atpase regulatory subunit Rpn6.
    
 0.639
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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