STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316TXH4PHP domain-like protein. (439 aa)    
Predicted Functional Partners:
A0A316U0Z1
Uncharacterized protein.
  
 0.999
A0A316UFN0
POP4 domain-containing protein.
   
 0.999
A0A316U3Q2
POP1-domain-containing protein.
   
 0.998
A0A316U3S3
Uncharacterized protein.
    
 0.985
A0A316TXL8
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.954
A0A316UEJ0
Uncharacterized protein.
   
  0.943
A0A316TZK8
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.897
A0A316U333
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.897
A0A316U9W5
Kri1_C domain-containing protein.
   
  0.874
A0A316U3I1
L30e-like protein.
   
 0.867
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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