STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U0W9Uncharacterized protein. (925 aa)    
Predicted Functional Partners:
A0A316U046
HIT domain-containing protein.
   
  0.541
A0A316U9V0
Uncharacterized protein.
    
  0.539
A0A316UCU4
Transcription initiation factor TFIID-1.
    
  0.539
A0A316U4J6
Uncharacterized protein.
    
 0.516
A0A316U0P4
HIT-like protein.
   
 
  0.486
A0A316U9G2
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase.
   
 
  0.486
A0A316UFD3
Putative HNT1-adenosine 5`-monophosphoramidase.
   
 
  0.486
A0A316UHP9
HIT-like protein.
   
 
  0.477
A0A316UJF3
U3 small nucleolar RNA-associated protein 22.
   
 
  0.445
A0A316TZT4
Putative ISW2-ATPase component of a two subunit chromatin remodeling complex.
   
  0.442
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.