STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U200Uncharacterized protein. (195 aa)    
Predicted Functional Partners:
A0A316U9D3
TPR-like protein.
   
 0.992
A0A316U5N9
DUF850-domain-containing protein.
   
 
 0.979
A0A316U5V9
EMC1_C domain-containing protein.
    
 0.969
A0A316U7X9
Uncharacterized protein.
   
 
 0.961
A0A316UCM4
Uncharacterized protein.
    
 
 0.932
A0A316UFR2
Uncharacterized protein.
    
 
 0.924
A0A316U8C4
Uncharacterized protein.
   
 0.882
A0A316UEJ7
Uncharacterized protein.
    
 
 0.881
A0A316UBM0
Ribosomal protein S16.
   
    0.566
A0A316U2H3
Uncharacterized protein.
    
 
 0.474
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.