STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U2F2Rad21_Rec8 domain-containing protein. (166 aa)    
Predicted Functional Partners:
A0A316UDR8
DNA/RNA polymerase.
   
 0.940
A0A316U341
Structural maintenance of chromosomes protein.
   
 0.933
A0A316UE39
Structural maintenance of chromosomes protein.
   
 0.931
A0A316UA17
SCD domain-containing protein.
   
 0.925
A0A316TWY2
Uncharacterized protein.
   
 0.922
A0A316U7P4
Sister chromatid cohesion protein.
   
 0.904
A0A316UG88
Peptidase C50 domain-containing protein.
   
 0.902
A0A316UDR4
Serine/threonine-protein kinase.
   
 0.870
A0A316U425
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.831
A0A316UDN4
SMC hinge domain-containing protein.
   
 0.814
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.