STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U3D9DRMBL domain-containing protein. (962 aa)    
Predicted Functional Partners:
A0A316U393
CPSF_A domain-containing protein.
   
 0.895
A0A316UFJ6
Uncharacterized protein.
   
 0.879
A0A316UF35
SPOC domain-like protein.
    
 0.872
A0A316U3D3
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.865
A0A316UD17
Fip1 domain-containing protein.
    
 0.859
A0A316TY07
Ku DNA-binding complex, Ku70 subunit.
   
 0.830
A0A316UGD7
WD40 repeat-like protein.
    
 0.829
A0A316UHF7
Ssu72-like protein.
   
 0.810
A0A316U905
Uncharacterized protein.
    
 0.806
A0A316UDM7
Uncharacterized protein.
    
 0.806
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.