STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U3F6Kinase-like protein. (557 aa)    
Predicted Functional Partners:
A0A316TWW6
Autophagy-related protein.
   
 0.952
A0A316UAN9
APG6-domain-containing protein.
    
 0.947
A0A316UBJ6
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.946
A0A316UH04
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.946
A0A316U4G3
Phosphatidylinositol 3-kinase VPS34.
    
 0.945
A0A316UGV3
Uncharacterized protein.
    
 0.944
A0A316U678
Uncharacterized protein.
   
 0.942
A0A316U8G0
Uncharacterized protein.
   
 
 0.911
A0A316UE11
Uncharacterized protein.
    
 0.903
A0A316U0Y2
Autophagy-related protein 3.
   
 
 0.888
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.