STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316U3J4BING4CT-domain-containing protein. (676 aa)    
Predicted Functional Partners:
A0A316TZ99
Nop14-like protein.
   
 0.999
A0A316U2B4
Nucleic acid-binding protein.
   
 0.999
A0A316U3N0
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
A0A316U3W0
WD40 repeat-like protein.
   
 0.999
A0A316U4J4
Sas10 domain-containing protein.
   
 0.999
A0A316U955
Uncharacterized protein.
   
 0.999
A0A316TWY0
Putative periodic tryptophan protein PWP2.
   
 
 0.998
A0A316TXD6
DUF663-domain-containing protein.
   
 
 0.998
A0A316U0V1
NUC189-domain-containing protein.
   
 0.998
A0A316U103
WD40 repeat-like protein.
   
 
 0.998
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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